Soil organisms are key to plant growth and ecosystem functions. Earthworms (EWs) enhance soil and indirectly affect plant growth, while their cutaneous excreta (CEx) contain bioactive compounds capable of eliciting plant responses. However, their role in plant immunity is still not well understood. We hypothesized that EWs and their CEx enhance plant defense against foliar pathogens by activating induced resistance. To test this, we evaluated the effect of Eisenia fetida and their CEx on Solanum lycopersicum (tomato), focusing on growth, physiology, and defense response against Botrytis cinerea. Plants were exposed to EWs, CEx, or water (control), followed by B. cinerea infection after two weeks. Gene expression of defense markers was assessed at 24 and 48 h post-inoculation (hpi), while physiological parameters and disease severity were evaluated at 72 hpi. EWs increased shoot biomass compared to CEx, while both treatments reduced root dry weight, suggesting a possible shift in resource allocation. CEx significantly reduced B. cinerea-induced leaf damage and showed a trend for flavonoid accumulation, a known marker of induced resistance. Both treatments, EWs and CEx, activated the jasmonic acid (JA) signaling pathway, with CEx specifically upregulating genes involved in fungal pathogen defense, sustaining their expression over time. The present study offers, for the first time, clear evidence that EW derived CEx can induce resistance by stimulating plant defense responses. Further biochemical, transcriptomic, and metabolomic analyses are needed to confirm indirect results, along with field validation. Nonetheless, the findings underscore the crucial role of soil biodiversity in enhancing crop resilience.

Several perennial and annual crops in the northern coast of Peru significantly reduce their productivity due to the damage caused by root-knot nematodes (RKN, Meloidogyne spp.). Routine nematode analyses carried out on these crops detected the presence of Pasteuria penetrans (Thorne) Sayre and Starr endospores attached to second stage juveniles (J2) of RKN. Soil sampling was carried out in different valleys to determine the prevalence and the number of attached endospores of P. penentrans. We also compared whether the differences between population fluctuations of Meloidogyne incognita (Kofoid and White) Chitwood in soils infested and not by P. penetrans were linked to a potential suppressive effect. 17.8% of soil samples collected from grapevine, pepper and banana plants in the valleys of Medio Piura, Bajo Piura, Alto Piura, Chira, San Lorenzo and Olmos showed presence of P. penetrans. No endopores were found in samples from crops such as sugar cane and asparagus. An average of 30.5 endospores per nematode was estimated. The J2 populations found in grapevine cultivated soils not infested with P. penetrans were 1.7 to 2.3 times higher than in soils infested by P. penetrans. The percentages of J2 with endospores were correlated (rho = 0.35; P < 0.02) with the abundance of M. incognita populations. These results confirm the widespread occurrence of P. penetrans in the crops and valleys sampled and its biological potential as a natural suppressor of Meloidogyne spp. populations in the northern coast of Peru. Further long-term surveys are needed to confirm the impact of P. penetrans on nematode regulation and collect isolates for taxonomic, molecular and host-specificity studies.

Several slug species are serious pests of agriculture and are difficult to control. One popular control method is the nematode Phasmarhabditis hermaphrodita, which has been used in slug control for > 25 years. However, there are reports of it failing to reduce slug numbers and damage in the field for unknown reasons. This may be due to lack of knowledge about how P. hermaphrodita performs when applied to different soils. We therefore assessed the survival, movement and pathogenicity of P. hermaphrodita infective juveniles (IJs) when added to six different soils (compost with and without peat, clay loam, loam, sandy loam and sandy soil). The soils were either frozen or autoclaved before use to eradicate resident nematodes prior to the experiment. P. hermaphrodita survived best in autoclaved compost without peat and in experiments with frozen soils, compost with and without peat was best. Survival of P. hermaphrodita was similar in other soils. Interestingly, in peat-free compost P. hermaphrodita reproduced prolifically, which may affect the long-term success of the nematode in the field as other life stages, apart from the IJ stage, cannot infect slugs. In infection experiments we found P. hermaphrodita added to compost with peat killed slugs faster than nematodes added to a sandy clay loam or sandy soil. In movement experiments, the nematodes remained within 3 cm of the application point in each soil. In summary, soil type severely affects P. hermaphrodita survival, and the ability to kill slugs; therefore it should be assessed by farmers and gardeners before use.

The root-knot nematode (RKN), Meloidogyne javanica, causes severe damage to a wide variety of crops. These nematodes significantly reduce tomato yield globally, causing symptoms such as stunted growth, galls on roots, chlorosis, and wilting, ultimately leading to host death. Classical nematode control methods, such as the application of chemical nematicides, are very effective; however, their use is limited due to conflicts with sustainable agriculture. Therefore, biological methods, are gaining attention as more environmentally friendly options. In the present study, 47 strains of bacteria were isolated from the rhizosphere of RKN-infected plants. The effect of these strains was studied on egg hatching and second stage infective juveniles (J2s) mortality of M. javanica, in vitro. Then, three holes were made in the soil around the roots of non-inoculated and nematode inoculated tomato plants and a suspension of 15 mL of three isolates with the greatest negative effect on hatching and J2s mortality (107 CFU/ml), was poured into the holes. Stenotrophomonas maltophilia CPHE1, Peribacillus frigoritolerans Rhs-L31 and Bacillus cereus Pt0-RL12 improved the vegetative indices of inoculated plants compared to control plants. These strains significantly reduced nematode hatching and significantly increased mortality of nematode J2s; and in greenhouse pot experiments significantly reduced the number of nematode eggs and egg masses, root galls, and nematode reproduction factor. In each case, inoculation with the bacterial strains significantly increased peroxidase and superoxide dismutase activity, and decreased catalase activity in tomato roots infected with M. javanica. The present study indicates the potential of these bacterial strains for biocontrol of M. javanica on tomato.

Genera Pseudomonas and Xanthomonas include bacterial species that are etiological agents of several diseases of major vegetable crops, such as tomato, pepper, bean, cabbage and cauliflower. The bacterial pathogens of those genera may cause severe crop damage, leading to symptoms like leaf spots, wilting, blights, and rotting. These plant pathogens can affect propagation materials and spread rapidly through plant tissues, contaminated soils, or water sources, making them challenging to control using conventional chemical products alone. Biopesticides, such as essential oils (EOs), are nowadays studied, tested and formulated by employing nano- and micro-technologies as innovative biological control strategies to obtain more sustainable products using less heavy metal ions. Moreover, there is a growing interest in exploring new biological control agents (BCAs), such as antagonistic bacterial and fungal species or bacteriophages and understanding their ecology and biological mechanisms to control bacterial phytopathogens. These include direct competition for nutrients, production of antimicrobial compounds, quorum quenching and indirect induction of systemic resistance. Optimisation of the biocontrol potential goes through the development of nanoparticle-based formulations and new methods for field application, from foliar sprays to seed coatings and root inoculation, aimed to improve microbial stability, shelf life, controlled release and field performance. Overall, the use of biological control in horticultural crops is an area of research that continues to advance and shows promising potential. This review aims to provide an in-depth exploration of commercially accessible biocontrol solutions and innovative biocontrol strategies, with a specific focus on the management of bacterial diseases in vegetable crops caused by Pseudomonas and Xanthomonas species. In this article, we highlighted the advancements in the development and use of EOs and other BCAs, emphasizing their potential or shortcomings for sustainable disease management. Indeed, despite the reduced dependence on synthetic pesticides and enhanced crop productivity, variable regulatory frameworks, compatibility among different BCAs, and consistent performance under field conditions are among the current challenges to their commercialization and use. The review seeks to contribute valuable insights into the evolving landscape of biocontrol in vegetable crops and to provide guidance for more effective and eco-friendly solutions against plant bacterial diseases.

This study aims to construct essential information on the pests attacking Cnidium officinale Makino, which is one of the most important medicinal plants in Korea and neighboring countries. Based on the current survey, a total of 12 species were identified, including three above-ground pests attacking flowers, leaves, and stems, as well as ten soil pests attacking roots. In the vertical distribution of damaged roots, the dominant species is bulb mite (Rhizoglyphus robini) followed by onion maggot (Delia antiqua). Based on this study and the previous literature, the total number of species of pests reported to attack C. officinale is 36, including 3 on flowers, 16 on leaves, 6 on stems, and 11 on roots. We also investigated and compiled a list of natural enemies based on all available information and the current study, totaling 14 species. Parasitus sp., Macrocheles glaber, and Smicroplectrus sp. were identified as candidate natural enemies of root pests.

Monilinia spp., which causes brown rot, is one of the most damaging pathogens in stone fruits. Researchers are exploring epiphytic and endophytic microorganisms with the potential to suppress pathogens, control pathogenic microorganisms, and/or promote plant growth. In this study, microorganisms with antagonistic activity against three Monilinia species were isolated from plum orchard soil and plum fruits. Antagonism tests in vitro showed strong antagonistic properties of six strains of bacteria and two yeast-like fungi against M. fructigena, M. fructicola, and M. laxa, with growth inhibition from 45.5 to 84.6%. The antagonists were identified and characterized at the genetic level using whole genome sequencing (WGS). Genes involved in antibiotic resistance, virulence, secondary metabolite synthesis, and plant growth promotion were identified and characterized through genome mapping, gene prediction, and annotation. None of the microorganisms studied were predicted to be pathogenic to humans. The results of this study indicate that the bacteria Bacillus pumilus, B. velezensis, two strains of Lysinibacillus agricola, Pseudomonas chlororaphis isolated from stone fruit orchard soil, and the yeast-like fungus Aureobasidium pullulans, isolated from plums, are promising candidates for the biological control of Monilinia spp.

Kiwifruit soft rot is a disease caused by fungal pathogens such as Botryosphaeria dothidea, which considerably restricts the development of kiwifruit industry. To provide novel management strategies against kiwifruit soft rot disease, potential biocontrol actinomycete strains were isolated from kiwifruit rhizosphere soil. A total of 21 actinomycete strains were obtained and strain SC-3 exhibited the highest biocontrol activity against B. dothidea. Based on the morphological, biochemical and molecular characteristics strain SC-3 was identified as Streptomyces albidoflavus. The SC-3 and its aseptic filtrate (AF) exhibited excellent antifungal activities against 11 tested pathogenic fungi. AF displayed antifungal effects through suppressing mycelial growth, spore germination, and the pathogenicity of B. dothidea. Electron microscopy analysis revealed that AF could cause significant alterations on ultrastructure of B. dothidea. Moreover, AF severely damaged cell membrane integrity, resulting in the leakage of cellular components in B. dothidea. Metabolomic analyses of SC-3 AF revealed the presence of several important antifungal compounds in the AF such as antimycin, and candicidin. Correspondingly, the whole genome analyses of SC-3 identified gene clusters responsible for the biosynthesis of these compounds. Overall, SC-3 is a potential biological control agent against B. dothidea and other fungal phytopathogens.

BackgroundEnergy flows in most food chains in the agroecosystem are crowned with beneficial natural enemies including different species of predatory and parasitic insects, birds and animals. They are utilized in organic and IPM cotton production to replace the conventional insecticides usually applied in cotton production.ResultsNatural populations of six coccinellids, five staphylinids and two carabids (Coleoptera), three anthocorids and three reduviids (Heteroptera), five syrphids (Diptera, three labidurids (Dermaptera), two chrysopids (Neuroptera) and one thripid (Thysanoptera) species were manipulated in Egyptian clover to aggregate in seed production stripes (stripe technique) adjacent to and across the cotton fields during April-May, 2022. These 30 predatory species represent 112 energy flow routes in food chains preying on tetranychid mites, aphids, thrips, whiteflies and cotton leaf worm attacking cotton plants during vegetative growth stage beginning from April to May 2022. High populations of these predators develop along the clover season (November-May) on different pests where no insecticide applications occur. They aggregate in the flowering clover stripes left for seed production feeding on nectar, pollens and remaining pests. By dryness of the clover stripes, populations of all these predatory species abandon the clover, migrating outwards into the adjacent cotton or corn fields showing an excellent high protection against cotton pests suppressing their populations far away under the level of economic threshold damage during vegetative growth stage. Dressing cotton seeds with Bacillus amyloliquefaciens as antagonist protects the seedlings from soil-borne diseases. Insect pheromone traps detected the first appearance of the pink bollworm, Pectinophora gossypiella (Saund.) moths, the cotton bolls are attacked also by the spiny bollworm, Earias insulana (Boisd.). The egg parasitoid Trichogramma evanescens (West.) was released in 6 successive releases to guide the energy flow in favor of the parasitoid by getting it from egg contents of these two pests, which resulted in high protection of cotton bolls. This study aims better understanding of biodiversity and the routes of energy flow among the complex net of food chains governing the bio-dynamics in the Egyptian agroecosystem, which enabled the development of the present strategy to completely abandon application of the conventional insecticides and chemical fertilization for organic cotton production in Egypt.ConclusionThe study is an approach contributing to improvement of the agroecosystem and production of healthy crops.

Certain entomopathogenic fungi, such as Beauveria bassiana, are highly pathogenic to arthropod pests and are able to colonize plant tissues, thereby enhancing both plant growth and disease resistance. This study assessed three B. bassiana strains (CBM1, CBM2, and CBM3) for their pathogenicity toward insect larvae and colonization potential in wheat. The insecticidal activity of the fungi against the larvae of the major lepidopteran pests Helicoverpa armigera, Spodoptera frugiperda, Mythimna separata, and Plutella xylostella was determined. The fungi were then applied to wheat plants using seed immersion and soil drench methods; their colonization rates were compared, and the impacts of fungal colonization on wheat growth and survival were evaluated. The results demonstrated that all three strains were effective in reducing insect damage, with B. bassiana CBM1 exhibiting the highest pathogenicity followed by CBM3 and CBM2. B. bassiana CBM1 was particularly effective, with a significantly higher colonization rate achieved through soil drenching compared to seed immersion. The soil inoculation of B. bassiana resulted in increased plant height at 30 days after sowing (DAS) and root length at 15 DAS compared to the control group. B. bassiana CBM1-colonized wheat increased the mortality of fall armyworm. This research has enriched the biological control microbial resource pool and highlights the potential of B. bassiana in integrated pest management strategies.