The impact of global climate change and human-induced nitrogen (N) deposition on winter weather patterns will have consequences for soil N cycling and greenhouse gas emissions in temperate deserts. Biological soil crusts (referred to as biocrusts) are crucial communities in soil and significant sources of nitrous oxide (N2O) emission in desert ecosystems and are sensitive to environmental changes. The contribution of bacteria and fungi to N2O production in drylands has been acknowledged. However, the effect of changes in snow cover and N deposition on the N2O production of different microbial groups of microorganisms is not yet clear. In this study, we examine the responses of fungi and bacteria mediated pathways involved in soil N2O production from biocrusts to longterm snow cover manipulation and N addition experiments in the Gurbantunggut Desert. These soils were incubated and subjected to biocide treatments (such as cycloheximide and streptomycin, and fungal and bacterial inhibitors), after which rates of potential nitrification and N2O production were measured. Compared with controls, snow removal treatments from bare sand, lichen crust and moss crust reduced background rates of N2O production by 29.41 %, 26.21 % and 20.49 %, respectively; N2O production rates were 1.53-fold higher in bare sand, 1.38-fold higher in lichen crust, and 1.56-fold higher in moss crust after N addition. The addition of streptomycin significantly reduced the potential nitrification rates of bare sand and biocrusts, indicating that bacteria may be important sources of NO3- production in biocrusts rather than fungi. Conversely, fungi were main sources of N2O production in biocrusts. Additionally, fungi also played a major role in N2O production in biocrusts after snow cover manipulation and N addition. Both snow cover manipulation and N addition treatment indirectly affected the N2O production in biocrusts by considerably affecting the content of substrate N and the abundance of microbial groups. Our research suggests that fungi are main contributors for denitrification in biocrusts, and that snow cover changes (removal snow and double snow) and N addition alter the contribution of biotic pathways responsible for N cycling.
2025-01-01 Web of ScienceChanging precipitation patterns and global warming have greatly changed winter snow cover, which can affect litter decomposition process by altering soil microenvironment or microbial biomass and activity. However, it remains unknown how and to what extent snow cover affects litter decomposition during winter and over longer periods of time. Here, we conducted a meta-analysis to synthesize litter decomposition studies under different levels of snow cover. Overall, deepened snow significantly enhanced litter decomposition rate and mass loss by 17% and 3%, respectively. Deepened snow enhanced litter carbon loss by 7% but did not impact the loss of litter nitrogen or phosphorus. Deepened snow increased soil temperature, decreased the frequency of freeze-thaw cycles, and stimulated microbial biomass carbon and bacterial biomass during winter, but had no effect on these parameters in summer. The promoting effect of deepened snow cover on litter decomposition in winter is mainly due to its positive effect on microbial decomposition by increasing soil temperature and reducing freezethaw cycles exceeded its negative effect on physical fragmentation of litter by reducing freeze-thaw cycles. Our findings indicate that the changes in winter snow cover under global change scenarios can greatly impact winter litter decomposition and the associated carbon cycling, which should be taken into consideration when assessing the global carbon budget in modeling.
2024-06-01 Web of ScienceSoil supports life by serving as a living, breathing fabric that connects the atmosphere to the Earth's crust. The study of soil science and pedology, or the study of soil in the natural environment, spans scales, disciplines, and societies worldwide. Soil science continues to grow and evolve as a field given advancements in analytical tools, capabilities, and a growing emphasis on integrating research across disciplines. A pressing need exists to more strongly incorporate the study of soil, and soil scientists, into research networks, initiatives, and collaborations. This review presents three research areas focused on questions of central interest to scientists, students, and government agencies alike: 1) How do the properties of soil influence the selection of habitat and survival by organisms, especially threatened and endangered species struggling in the face of climate change and habitat loss during the Anthropocene? 2) How do we disentangle the heterogeneity of abiotic and biotic processes that transform minerals and release life-supporting nutrients to soil, especially at the nano-to microscale where mineral-water-microbe interactions occur? and 3) How can soil science advance the search for life and habitable environments on Mars and beyond-from distinguishing biosignatures to better utilizing terrestrial analogs on Earth for planetary exploration? This review also highlights the tools, resources, and expertise that soil scientists bring to interdisciplinary teams focused on questions centered belowground, whether the research areas involve conservation organizations, industry, the classroom, or government agencies working to resolve global chal-lenges and sustain a future for all.
2023-02-01 Web of ScienceReduction in snow cover is a prominent aspect of global change. Freeze-thaw cycles (FTCs) of different amplitudes and durations in soil due to insufficient thermal insulation may alter microbial diversity and key ecological functions mediated by microorganisms. These changes could then further alter the cycling of material and energy in the ecosystem. Yet despite many assessments, the impact of FTCs upon microbial diversity remains poorly understood. Here, 546 observations from 61 published studies were collected for a global meta-analysis with the objective to explore how soil microbial diversity and C and N dynamics it drives respond to FTCs. The results showed that: in general, FTCs did not lead to a reduction of microbial alpha-diversity, but they did reduce levels of soil microbial biomass carbon, microbial biomass nitrogen, and phospholipid fatty acid by 7%, 12%, and 11%, respectively; they also significantly changed the microbial community structure. FTCs did not significantly affect the alpha-diversity of bacteria and fungi, but community structures of both were changed significantly, with that of the bacteria more sensitive to FTCs. FTCs were responsible for a 6% decrease in functions related to C, N cycling, which could be explained by the changes found in microbial biomass and community structure. FTCs could also indirectly impact microbial biomass via changed pH and soil water content (SWC). The response of microbial community to FTCs was related to the FTC frequency, freezing temperature and sampling time. FTCs had a large effect on the C and N pool components and fluxes in soil. It is particularly noteworthy that FTCs drove a 137% increase in N2O emission. Further, the changes in pH and SWC directly affected the C and N pool components and fluxes. The results of current meta-analysis deepen the comprehensive understanding of the effects of FTCs on the soil microbial community and C and N dynamics it mediated, and provide a reference for subsequent research in terms of experimental scheme and scientific issues requiring close attention.
2022-05-01 Web of ScienceGlobal climate change is altering the amounts of ice and snow in winter, and this could be a major driver of soil microbial processes. However, it is not known how bacterial and fungal communities will respond to changes in the snow cover. We conducted a snow manipulation experiment to study the effects of snow removal on the diversity and composition of soil bacterial and fungal communities. A snow manipulation experiment was carried out on the meadow steppe in Hulunbuir, Inner Mongolia, China, during the winter period October 2019-March 2020. Soil samples were collected from the topsoil (0-10 cm) in mid-March 2020 (spring snowmelt period). Snow removal significantly reduced soil moisture and soil ammonium concentration. Lower snow cover also significantly changed the fungal community structure and beta diversity. Snow removal did not affect the bacterial community, indicating that fungal communities are more sensitive to snow exclusion than bacterial communities. The relative importance analysis (using the Lindeman-Merenda-Gold method) showed that available nitrogen (AN), soil water content (SWC), total organic carbon (TOC), microbial biomass carbon (MBC), and microbial biomass nitrogen (MBN) together explained 94.59% of the variation in soil fungal beta diversity, where AN was identified as the most important predictor. These finding provide insights into potential impacts of climate warming and associated reduced snow cover on soil microbial communities and processes.
2022-03-01 Web of ScienceWinter temperatures are projected to increase in Central Europe. Subsequently, snow cover will decrease, leading to increased soil temperature variability, with potentially different consequences for soil frost depending on e.g. altitude. Here, we experimentally evaluated the effects of increased winter soil temperature variability on the root associated mycobiome of two plant species (Calluna vulgaris and Holcus lanatus) at two sites in Germany; a colder and wetter upland site with high snow accumulation and a warmer and drier lowland site, with low snow accumulation. Mesocosm monocultures were set-up in spring 2010 at both sites (with soil and plants originating from the lowland site). In the following winter, an experimental warming pulse treatment was initiated by overhead infrared heaters and warming wires at the soil surface for half of the mesocosms at both sites. At the lowland site, the warming treatment resulted in a reduced number of days with soil frost as well as increased the average daily temperature amplitude. Contrary, the treatment caused no changes in these parameters at the upland site, which was in general a much more frost affected site. Soil and plant roots were sampled before and after the following growing season (spring and autumn 2011). High-throughput sequencing was used for profiling of the root-associated fungal (ITS marker) community (mycobiome). Site was found to have a profound effect on the composition of the mycobiome, which at the upland site was dominated by fast growing saprotrophs (Mortierellomycota), and at the lowland site by plant species-specific symbionts (e.g. Rhizoscyphus ericae and Microdochium bolleyi for C. vulgaris and H. lanatus respectively). The transplantation to the colder upland site and the temperature treatment at the warmer lowland site had comparable consequences for the mycobiome, implying that winter climate change resulting in higher temperature variability has large consequences for mycobiome structures regardless of absolute temperature of a given site.
2021-08-01 Web of ScienceAims Alpine forest gaps can control understory ecosystem processes by manipulating hydrothermal dynamics. Here, we aimed to test the role of alpine forest gap disturbance on total phenol loss (TPL) from the decomposing litter of two typical shrub species (willow, Salix paraplesia Schneid., and bamboo, Fargesia nitida (Mitford) Keng f.). Methods We conducted a field litterbag experiment within a representative fir (Abies faxoniana Rehd.) forest based on 'gap openness treatments' (plot positions in the gap included the gap center south, gap center north, canopy edge, expanded edge and closed canopy). The TPL rate and litter surface microbial abundance (fungi and bacteria) of the two shrub species were measured during the following periods over 2 years: snow formation (SF), snow cover (SC), snow melting (ST), the early growing season (EG) and the late growing season (LG). Important Findings At the end of the study, we found that snow cover depth, freeze-thaw cycle frequency and the fungal copies g(-1) to bacterial copies g(-1) ratio had significant effects on litter TPL. The abundances of fungi and bacteria decreased from the gap center to the closed canopy during the SF, SC, ST and LG periods and showed the opposite trend during the EG periods. The rate of TPL among plot positions closely followed the same trend as microbial abundance during the first year of incubation. In addition, both species had higher rates of TPL in the gap center than at other positions during the first winter, first year and entire 2-year period. These findings suggest that alpine forest gap formation accelerates litter TPL, although litter TPL exhibits dual responses to gap disturbance during specific critical periods. In conclusion, reduced snow cover depth and duration during winter warming under projected climate change scenarios or as gaps vanish may slow litter TPL in alpine biomes.
2020-06-01 Web of SciencePermafrost soils contain c. 1980 Pg carbon (C; Schuur et al., 2015), more than twice the size of the atmospheric C pool. Thawing permafrost, subsequent changes in hydrological conditions and resulting microbial decomposition of previously frozen organicCis one of the most significant potential feedbacks from terrestrial ecosystems to the atmosphere in a changing climate (Schuur et al., 2008; Hugelius et al., 2012; Hope& Schaefer, 2016): such changes are now occurring at a dramatic pace over large regions of the Northern Hemisphere.
2020-04-01 Web of ScienceBackground: Climate models predict substantial changes in temperature and precipitation patterns across Arctic regions, including increased winter precipitation as snow in the near future. Soil microorganisms are considered key players in organic matter decomposition and regulation of biogeochemical cycles. However, current knowledge regarding their response to future climate changes is limited. Here, we explore the short-term effect of increased snow cover on soil fungal, bacterial and archaeal communities in two tundra sites with contrasting water regimes in Greenland. In order to assess seasonal variation of microbial communities, we collected soil samples four times during the plant-growing season. Results: The analysis revealed that soil microbial communities from two tundra sites differed from each other due to contrasting soil chemical properties. Fungal communities showed higher richness at the dry site whereas richness of prokaryotes was higher at the wet tundra site. We demonstrated that fungal and bacterial communities at both sites were significantly affected by short-term increased snow cover manipulation. Our results showed that fungal community composition was more affected by deeper snow cover compared to prokaryotes. The fungal communities showed changes in both taxonomic and ecological groups in response to climate manipulation. However, the changes were not pronounced at all sampling times which points to the need of multiple sampling in ecosystems where environmental factors show seasonal variation. Further, we showed that effects of increased snow cover were manifested after snow had melted. Conclusions: We demonstrated rapid response of soil fungal and bacterial communities to short-term climate manipulation simulating increased winter precipitation at two tundra sites. In particular, we provide evidence that fungal community composition was more affected by increased snow cover compared to prokaryotes indicating fast adaptability to changing environmental conditions. Since fungi are considered the main decomposers of complex organic matter in terrestrial ecosystems, the stronger response of fungal communities may have implications for organic matter turnover in tundra soils under future climate.
2019-09-18 Web of Science