An anomalous warm weather event in the Antarctic McMurdo Dry Valleys on 18 March 2022 created an opportunity to characterize soil biota communities most sensitive to freeze-thaw stress. This event caused unseasonal melt within Taylor Valley, activating stream water and microbial mats around Canada Stream. Liquid water availability in this polar desert is a driver of soil biota distribution and activity. Because climate change impacts hydrological regimes, we aimed to determine the effect on soil communities. We sampled soils identified from this event that experienced thaw, nearby hyper-arid areas, and wetted areas that did not experience thaw to compare soil bacterial and invertebrate communities. Areas that exhibited evidence of freeze-thaw supported the highest live and dead nematode counts and were composed of soil taxa from hyper-arid landscapes and wetted areas. They received water inputs from snowpacks, hyporheic water, or glacial melt, contributing to community differences associated with organic matter and salinity gradients. Inundated soils had higher organic matter and lower conductivity (p < .02) and hosted the most diverse microbial and invertebrate communities on average. Our findings suggest that as liquid water becomes more available under predicted climate change, soil communities adapted to the hyper-arid landscape will shift toward diverse, wetted soil communities.

Evaluating petroleum contamination risk and implementing remedial measures in agricultural soil rely on indicators such as soil metal(loid)s and microbiome alterations. However, the response of these indicators to petroleum contamination remains under-investigated. The present study investigated the soil physicochemical features, metal(loid)s, microbial communities and networks, and phospholipid fatty acids (PLFAs) community structures in soil samples collected from long-(LC) and short-term (SC) petroleum-contaminated oil fields. The results showed that petroleum contamination increased the levels of soil total petroleum hydrocarbon, carbon, nitrogen, sulfur, phosphorus, calcium, copper, manganese, lead, and zinc, and decreased soil pH, microbial biomass, bacterial and fungal diversity. Petroleum led to a rise in the abundances of soil Proteobacteria, Ascomycota, Oleibacter, and Fusarium. Network analyses showed that the number of network links (Control vs. SC, LC = 1181 vs. 700, 1021), nodes (Control vs. SC, LC = 90 vs. 71, 83) and average degree (Control vs. SC, LC = 26.244 vs. 19.718, 24.602) recovered as the duration of contamination increased. Petroleum contamination also reduced the concentration of soil PLFAs, especially bacterial. These results demonstrate that brief exposure to high levels of petroleum contamination alters the physicochemical characteristics of the soil as well as the composition of soil metal(loid)s and microorganisms, leading to a less diverse soil microbial network that is more susceptible to damage. Future research should focus on the culturable microbiome of soil under petroleum contamination to provide a theoretical basis for further remediation. (c) 2025 The Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences. Published by Elsevier B.V.

Fragile fruits, which are prone to mechanical damage and microbial infection, necessitate protective materials that possess both cushioning and antimicrobial properties. In this study, we present a novel genipin-crosslinked chitosan/gelatin aerogel (CS/GEL/GNP) synthesized through direct mixing and free-drying techniques. The mechanical properties and cushioning capacities of the CS/GEL/GNP aerogel were thoroughly characterized, alongside an evaluation of its antimicrobial efficacy. The composite aerogel demonstrated remarkable compressibility and shape recovery characteristics. In a transportation simulation test, the aerogel effectively protected strawberries from mechanical damage. Furthermore, the composite aerogel exhibited enhanced antimicrobial activities against Escherichia coli, Staphylococcus aureus and Botrytis cinerea in vitro. The quality of strawberries was successfully maintained at ambient temperature when packaged with the CS/GEL/GNP. Notably, the aerogel could be completely degraded in the soil within 21 days and is nontoxic to cells. Consequently, the dual-functional CS/GEL/GNP aerogel presents a promising option for packaging materials aimed at protecting delicate fruits.

Lead (Pb), a prevalent heavy metal contaminant in aquatic environments, has complex effects on the gut microbiome function of aquatic animals. In this study, metagenomic analysis of Bufo gargarizans tadpoles was carried out following Pb exposure. Moreover, histological analysis was performed on the intestines. The results showed that Pb exposure induced histological damage to the intestinal epithelium. Significant differences in microbial abundance and function were detected in the 200 mu g/L Pb group compared to the control group. Specifically, an increase in Bosea and Klebsiella was noted at 200 mu g/L Pb, which potentially could induce inflammation in tadpoles. Notably, the decrease in the abundance of glycoside hydrolases subsequent to exposure to 200 mu g/L Pb is likely to attenuate carbohydrate metabolism. Furthermore, increased fluoroquinolone-related antibiotic resistance genes (ARGs), phenolic-related ARGs, and iron uptake systems following 200 mu g/L Pb exposure might heighten the disease risk for tadpoles. These discoveries augment our comprehension of the influences of Pb on the intestinal well-being of amphibians and offer valuable insights for further assessment of the ecological risks that Pb poses to amphibians.

The mitigation of seismic soil liquefaction in sand with fine content presents a challenge, demanding efficient strategies. This research explores the efficacy of Microbial-Induced Partial Saturation (MIPS) as a biogeotechnical technique to improve the liquefaction resistance of sandy soils with plastic fines. By leveraging the natural metabolic processes of indigenous microorganisms, this method introduces biogenic gas production within the soil matrix, effectively reducing its degree of saturation. This partial desaturation alters the soil's response to cyclic loading, aiming to mitigate the risk of liquefaction under dynamic loading conditions. Experimental results from a series of undrained strain-controlled cyclic shear tests reveal that even a modest reduction in saturation significantly enhances the soil's stability against seismic-induced liquefaction. The investigation extends to analyzing the effectiveness of the MIPS treatment in sands with low-plasticity clay content, offering insights into the interaction between microbial activity, soil texture, and liquefaction potential. Results show that while plasticity plays a key role in improving the cyclic response of soils, the influence of MIPS treatment remains noteworthy, even in sand with plastic fines. Additionally, a modified predictive formulation is introduced, incorporating a calibrated parameter to account for the influence of fines' plasticity on excess pore pressure generation.

Revealing regional-scale differences in microbial community structure and metabolic strategies across different land use types and soil types and how these differences relate to soil carbon (C) cycling function is crucial for understanding the mechanisms of soil organic carbon (SOC) sequestration in agroecosystems. However, our understanding of these knowledge still remains unclear. Here, we employed metagenomic methods to explore differences in microbial community structure, functional potential, and ecological strategies in calcareous soil and red soil, as well as the relationships among these factors and SOC stocks. The results showed that the bacterial absolute abundance and diversity were higher and the fungal absolute abundance and diversity were lower in calcareous soil than in red soil. This may be attributed to stochastic processes dominated the assembly of bacterial and fungal communities in calcareous soil and red soil, respectively. This in turn was closely related to soil pH and Ca2 + content. Linear discriminant analysis showed that genes related to microbial growth and reproduction (e.g., amino acid biosynthesis, central carbon metabolism, and membrane transport) were enriched in calcareous soil. While genes related to stress tolerance (e.g., bacterial chemotaxis, DNA damage repair, biofilm formation) were enriched in red soil. The great difference in soil properties between calcareous soil and red soil may be the cause of this result. Compared with red soil, the higher soil pH, SOC, and calcium and magnesium content in calcareous soil increased the bacterial absolute abundance and diversity, thus increasing the SOC sequestration potential of microorganisms, but also increased the decomposition of organic carbon by fungi, thus increasing the SOC loss potential. However, the bacterial absolute abundance and diversity were much higher than that of fungi. Therefore, soil carbon sequestration potential was still greater than its loss potential in karst agroecosystems. Agricultural disturbance intensity may be the main factor affecting these relationships. Overall, these findings advance our understanding of how soil microbial metabolic processes are related to SOC sequestration.

Hurricane Otto caused sequential changes in tropical soil microbiota over 5 years.Acidobacteria were critical early decomposers of deposited canopy debris for 3 years.Complex C degrading fungi were critical later decomposers of debris starting at 4 years.A suite of C, N and microbial indicators should prove valuable for forest managers.Hurricanes cause significant damage to tropical forests; however, little is known of their effects on decomposition and decomposer communities. This study demonstrated that canopy debris deposited during Hurricane Otto stimulated sequential changes in soil carbon (C) and nitrogen (N) components, and decomposer microbial communities over 5 years. The initial response phase occurred within 2 years post-hurricane and appeared associated with decomposition of the labile canopy debris, suggested by: increased DNA sequences (MPS) of the Acidobacterial community (as common decomposers of labile plant material), decreases in total organic C (TOC), increased biomass C, respiration, and NH4+, conversion of organic C in biomass, and decreased MPS of complex organic C decomposing (CCDec) Fungal community. After 3 years post-hurricane, the later response phase appeared associated with decomposition of the more stable components of the canopy debris, suggested by: increased MPS of the Fungal CCDec community, TOC, stabilized Respiration, decreased Biomass C, the return to pre-hurricane levels of the conversion of organic C to biomass, and decreased MPS of Acidobacterial community. These changes in the microbial community compositions resulted in progressive decomposition of the hurricane-deposited canopy material within 5 years, resulting several potential indicators of different stages of decomposition and soil recovery post-disturbance.

Poly(butylene adipate-co-terephthalate) (PBAT) is a promising polymer with excellent mechanical properties and biodegradability. However, knowledge gaps between its degradation and mineralization processes in soil hampers its environmental impact and application potential. In this study, we elucidated the degradation process of PBAT, starting with the degradation of high-molecular-weight polymers into 30 intermediates, before ultimately mineralized into CO2. Bacteria and fungi drove the degradation and mineralization of these intermediates. We discovered that PBAT was synergistically degraded by combinations of 27 bacterial and fungal biomarkers rather than by single biomarkers dominated by Bacteroidota, Acidobacteriota, and Ascomycota. These combinations of related functional genes perform various functions at every stage of PBAT degradation, including breaking down molecular structures, degrading intermediates, and mineralization. Bacterial biomarkers showed greater diversity than fungal biomarkers in degrading PBAT. Our findings provide useful insights into the degradation of PBAT in soil and a foundation for systematically evaluating and controlling the environmental behavior and safety of PBAT in soil.

The environmental prevalence of the tire wear-derived emerging pollutant N-(1,3-dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6PPD-Q) has increasingly raised public concern. However, knowledge of the adverse effects of 6PPD-Q on soil fauna is scarce. In this study, we elucidated its impact on soil fauna, specifically on the earthworm Eisenia fetida. Our investigation encompassed phenotypic, multi-omics, and microbiota analyses to assess earthworm responses to a gradient of 6PPD-Q contamination (10, 100, 1000, and 5000 mu g/kg dw soil). Post-28-day exposure, 6PPD-Q was found to bioaccumulate in earthworms, triggering reactive oxygen species production and consequent oxidative damage to coelomic and intestinal tissues. Transcriptomic and metabolomic profiling revealed several physiological perturbations, including inflammation, immune dysfunction, metabolic imbalances, and genetic toxicity. Moreover, 6PPD-Q perturbed the intestinal microbiota, with high dosages significantly suppressing microbial functions linked to metabolism and information processing (P < 0.05). These alterations were accompanied by increased mortality and weight loss in the earthworms. Specifically, at an environmental concentration of 6PPD-Q (1000 mu g/kg), we observed a substantial reduction in survival rate and physiological disruptions. This study provides important insights into the environmental hazards of 6PPD-Q to soil biota and reveals the underlying toxicological mechanisms, underscoring the need for further research to mitigate its ecological footprint.

The efficacy and environmental effects of using metal-organic frameworks (MOFs) for the remediation of arsenic (As)-contaminated soil, a significant global problem, remain unclear. This study evaluated MIL-88A(Fe) and MIL101(Fe) coupled with ramie (Boehmeria nivea L.) for As-contaminated soil remediation. A soil incubation experiment revealed that 10,000 mg kg-1 MIL-88A(Fe) and MIL-101(Fe) reduced As bioavailability by 77.1 % and 65.0 %, respectively, and increased residual As fractions by 8 % and 7 % through Fe-As co-precipitation and adsorption. Divergent environmental effects emerged, which were probably due to differences in the framework structures and organic ligands: MIL-88A(Fe) improved soil urease activity and bacterial diversity, whereas MIL101(Fe) induced acidification (decreasing soil pH by 25 %) and salinity stress (elevating soil electrical conductivity (EC) by 946 %). A pot experiment showed that 1000 mg kg-1 MOFs enhanced ramie biomass via As immobilization, whereas 5000 mg kg-1 MIL-101(Fe) suppressed growth because exposure to the MOF caused root damage. The MOFs enriched Pseudomonas (As-oxidizing) and suppressed Dokdonella (pathogenic), enhancing plant resilience. Notably, 100 mg kg-1 MIL-101(Fe) increased As translocation to stems (14.8 %) and leaves (27.6 %). Hydroponic analyses showed that 50-200 mg L-1 MIL-101(Fe) mitigated As-induced chlorophyll degradation (elevating Soil and plant analyzer development (SPAD) by 12.8 %-28.3 %), whereas 500 and 1000 mg L-1 induced oxidative stress (reducing SPAD by 4.2 %-10.7 %). This study provides valuable insights into using Fe-based MOFs in soil remediation and highlights their beneficial and harmful effects.