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A novel actinomycete, strain 1_25(T), was isolated from soil under a black Gobi rock sample from Shuangta, PR China, and characterized using a polyphasic taxonomic approach. The results of comparative analysis of the 16S rRNA gene sequences indicated the 1_25(T) represented a member of the genus Streptomyces. Chemotaxonomic data revealed that 1_25(T) possessed MK-9(H-8) as the major menaquinone. The cell wall contained LL-diaminopimelic acid (LL-DAP) and the whole-cell sugar pattern consisted of ribose, glucose and galactose. Major fatty acid methyl esters were observed to be iso-C-16:0 (23.6%), and anteiso-C-15:0 (10.4%). The genomic DNA G+C content of 1_25(T) was 69 mol%. The results of phylogenetic analysis based on 16S rRNA gene sequence indicated that 1_25(T) had high sequence similarity with Streptomyces qinglanensis 172205(T) (98.1%), Streptomyces lycii TRM 66187(T) (98 %), and Streptomyces griseocarneus JCM4580(T) (98 %). In addition to the differences in phenotypic characters, the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between 1_25(T) and closely related species were below the recommended threshold values for assigning strains to the same species. The fermentation product of 1_25(T) in ISP2 had an inhibitory effect on Staphylococcus aureus. On the basis of these genotypic and phenotypic characteristics, strain 1_25(T) (=JCM 34936(T)=GDMCC 4.216(T)) represents a novel species of the genus Streptomyces, for which the name Streptomyces gobiensis sp. nov. is proposed.

期刊论文 2024-12-09 DOI: http://dx.doi.org/10.1099/ijsem.0.005318 ISSN: 1466-5026
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