Biological soil crusts (BSCs) play a fundamental role in desert ecosystems by stabilizing soil, cycling nutrients, and retaining moisture. However, the assembly processes governing bacterial communities within BSCs remain largely unknown. This study aimed to reveal the spatiotemporal variations in the bacterial community diversity, co-occurrence patterns, and ecological assembly processes of BSCs and their underlying soils across different desert and seasonal conditions. We systematically analyzed the spatial differences in the bacterial diversity, co-occurrence networks, and community assembly processes of BSCs and their underlying soils using samples collected at various soil depths from different BSC types in different deserts. We discovered that BSC type and soil depth were the primary factors driving bacterial community assembly, while seasonal effects were weaker and more indirect, and mainly regulated community dynamics through changes in resource availability and environmental conditions. The underlying soils of moss- and lichen-BSCs exhibited higher bacterial diversity and richness than those of algae BSCs. In contrast, cyano-BSCs exhibited a lower diversity, but Cyanobacteria demonstrated the highest photosynthetic function. Among the different deserts, the community assembly of samples from the eastern Inner Mongolia deserts was largely influenced by environmental selection, whereas stochastic processes were more prominent in the central and western desert regions. A beta-nearest taxon index (beta NTI) analysis indicated that stochastic processes were dominant in surface BSC samples, while environmental selection played a stronger role in deeper layers. A co-occurrence network analysis revealed that surface BSC samples had a high degree of network connectivity, with those from moss- and lichen-BSCs being particularly high, and they also exhibited high modularity and local clustering that promoted the functional stability of the microbial communities. This study revealed the integrated effects of soil depth, BSC type, desert type, and resource availability on microbial community assembly in desert ecosystems. These findings provide a theoretical basis for the microbial management of BSCs and scientific insights to support restoration strategies in desert ecosystems.

Due to the growing focus on daily hygiene practices, sodium dodecyl sulfate (SDS), a widely used surfactant, is increasingly found in domestic sewage and rainfall runoff. Upon entering the lake-terrestrial ecotone, SDS affects the composition, abundance, and functional capacity of soil bacterial communities due to its bacteriostatic properties. To investigate the effects of long-term discharge of sewage containing low concentrations of SDS on microorganisms in the lake-terrestrial ecotone, alterations in bacterial community structure, functional genes, and biomass were examined using a simulated continuous pollutant input. The results indicated the following: (1) The degradation rate of sodium dodecyl sulfate (SDS) by soil microorganisms in the lake-terrestrial ecotone under long-term and low concentrations of SDS stress ranged from 11 to 16 mg/kgd. (2) The effects of low concentrations and long-term SDS stress on bacterial community structure and gene function in the lake-terrestrial ecotone differed significantly from those of short-term pollution. The damage to microbial-promoted material cycling in the lake-terrestrial ecotone was more severe; however, the proliferation of pathogenic bacteria remained continuously suppressed. (3) Soil bacteria in the lake-terrestrial ecotone responded to the stress of long-term and low concentrations of SDS primarily by enhancing chemotaxis and tolerance.

Riparian soils, together with vegetation, play a crucial role in supporting biodiversity and driving biogeochemical processes within river ecosystems. Conservation of riparian soils and artificial planting are essential for river ecosystem recovery following land degradation. Researchers focus on examining soil nutrients, microbial biomass, and organic acid metabolism in the interactions between plants and soil along riverbanks. However, the seasonal responses of riparian soils to artificial plantations have been infrequently reported in the existing literature. This study investigates the influence of seasonal variations on soil conditions and the growth of artificially planted species in the riparian zones of the Three Gorges Dam Reservoir (TGDR) in China. The species sampled include Cynodon dactylon, Hemarthria altissima, and Salix matsudana. These species provide valuable insight into soil properties along riparian zones, assessing interactions across different seasons: T1 (spring), T2 (summer), and T3 (autumn). The results demonstrated significant seasonal changes in soil organic matter, ammonium nitrogen, nitrate nitrogen, and other indicators between T1 and T3. Apart from invertase activity in H. altissima soil, enzyme activity peaked during T1. Dominant soil bacteria were examined using high-throughput 16S rDNA sequencing, revealing that the available bacteria belong to 62 phyla and 211 classes. Among the most abundant were Proteobacteria and Actinobacteria, averaging over 60 % across all soil samples. Principal component analyses accounted for 62.81 % (T1), 50.57 % (T2), and 54.08 % (T3) of the variation observed in the study, indicating that soil properties were predominantly influenced by the different seasonal phases, assuming all other factors remained constant. Pearson correlation analysis (p < 0.05) identified strong positive correlations between physical properties and all three plant species during T1 (r <= 0.94), as well as significant negative correlations with bacterial communities in T2 and T3 (r <= -1.00). These findings suggest that the selected plant species are well-suited to cultivation in the riparian zone of the TGDR. This study enhances our understanding of seasonal dynamics in riparian environments, offering practical insights into their management.

Comprehensive knowledge of bacterial ecology mainly in supraglacial habitats is pivotal particularly at the frontier of accelerated glacier retreat. In this study, bacterial diversity and community composition in glacial soil and meltwater runoff at the frontier of Baishui Glacier No.1 were evaluated using high throughput sequencing. Significant variations in the physiochemical parameters formed an ecological gradient between soil and meltwater runoff. Based on the richness and evenness indexes, the bacterial diversity was relatively higher in soil compared with meltwater runoff. Hierarchical clustering and bi-plot ordination revealed that the taxonomic composition of soil samples was highly similar and significantly influenced by the ecological parameters than the meltwater runoff. The overall relative abundance trend of bacterial phyla and genera were greatly varied in soil and water samples. The relative abundance of Proteobacteria was higher in water runoff samples (40.5-87%) compared with soil samples (32-52.7%). Proteobacteria, Firmicutes, and a little part of Cyanobacteria occupied a major portion of water runoff while the soil was dominated by Acidobacteria (6-16.2%), Actinobacteria (5-16%), Bacteroidetes (0.5-8.8%), and Cyanobacteria (0.1-8.3%) besides Proteobacteria and Firmicutes. Higher numbers of biomarkers were found in soil group compared with the water group. The study area is diverse in terms of richness, while community structures are not evenly distributed. This study provides a preliminary understanding of the bacterial diversity and shifts in community structure in soil and meltwater runoff at the frontier of the glacial. The findings revealed that the environmental factors are a significantly strong determinant of bacterial community structures in such a closely linked ecosystem.

Global climate change is accompanied by changes in the amounts of ice and snow. These changes have both a direct effect on the plant community structure, primary productivity and carbon cycle and an indirect influence on the belowground ecosystem. However, the effects of changes in snowpack on the soil environment and belowground ecological processes, particularly in soil microbial communities are still poorly understood in alpine meadows. We conducted a field study of controlled snowpack in the eastern margin of the Tibetan Plateau, where five treatments were set up, named as S0, S1, S2, S3, and S4 (S1: the amount of a natural snowpack; S2, S3, and S4 were twofold, threefold, and fourfold of Sl, respectively; and SO: completely removed snow). Soil physicochemical properties, soil community structure and diversity measured by 16S rRNA gene amplicons were studied. The results indicated that 1) as snowpack increased, the average soil temperature decreased, but soil moisture and soil compaction increased; 2) soil chemical properties (pH, available nitrogen, available potassium, available phosphorus, total nitrogen, total potassium, total phosphorus and total soil organic carbon) all changed as snowpack changed; and 3) increasing snowpack led to a decrease in the relative abundance of Acidobacteria, but Bacteroidetes and Actinobacteria did not decline in response to increasing snowpack. In summary, these results showed that soil bacterial communities are sensitive to changes in snowpack in alpine meadows.