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The central carbon (C) metabolic network is responsible for most of the production of energy and biosynthesis in microorganisms and is therefore key to a mechanistic understanding of microbial life in soil communities. Many upland soil communities have shown a relatively high C flux through the pentose phosphate (PP) or the Entner-Doudoroff (ED) pathway, thought to be related to oxidative damage control. We tested the hypothesis that the metabolic organization of the central C metabolic network differed between two ecosystems, an anoxic marsh soil and oxic upland soil, and would be affected by altering oxygen concentrations. We expected there to be high PP/ED pathway activity under high oxygen concentrations and in oxic soils and low PP/ED activity in reduced oxygen concentrations and in marsh soil. Although we found high PP/ED activity in the upland soil and low activity in the marsh soil, lowering the oxygen concentration for the upland soil did not reduce the relative PP/ED pathway activity as hypothesized, nor did increasing the oxygen concentration in the marsh soil increase the PP/ED pathway activity. We speculate that the high PP/ED activity in the upland soil, even when exposed to low oxygen concentrations, was related to a high demand for NADPH for biosynthesis, thus reflecting higher microbial growth rates in C-rich soils than in C-poor sediments. Further studies are needed to explain the observed metabolic diversity among soil ecosystems and determine whether it is related to microbial growth rates. IMPORTANCE We observed that the organization of the central carbon (C) metabolic processes differed between oxic and anoxic soil. However, we also found that the pentose phosphate pathway/Entner-Doudoroff (PP/ED) pathway activity remained high after reducing the oxygen concentration for the upland soil and did not increase in response to an increase in oxygen concentration in the marsh soil. These observations contradicted the hypothesis that oxidative stress is a main driver for high PP/ED activity in soil communities. We suggest that the high PP/ED activity and NADPH production reflect higher anabolic activities and growth rates in the upland soil compared to the anaerobic marsh soil. A greater understanding of the molecular and biochemical processes in soil communities is needed to develop a mechanistic perspective on microbial activities and their relationship to soil C and nutrient cycling. Such an increased mechanistic perspective is ecologically relevant, given that the central carbon metabolic network is intimately tied to the energy metabolism of microbes, the efficiency of new microbial biomass production, and soil organic matter formation. We observed that the organization of the central carbon (C) metabolic processes differed between oxic and anoxic soil. However, we also found that the pentose phosphate pathway/Entner-Doudoroff (PP/ED) pathway activity remained high after reducing the oxygen concentration for the upland soil and did not increase in response to an increase in oxygen concentration in the marsh soil. These observations contradicted the hypothesis that oxidative stress is a main driver for high PP/ED activity in soil communities. We suggest that the high PP/ED activity and NADPH production reflect higher anabolic activities and growth rates in the upland soil compared to the anaerobic marsh soil. A greater understanding of the molecular and biochemical processes in soil communities is needed to develop a mechanistic perspective on microbial activities and their relationship to soil C and nutrient cycling. Such an increased mechanistic perspective is ecologically relevant, given that the central carbon metabolic network is intimately tied to the energy metabolism of microbes, the efficiency of new microbial biomass production, and soil organic matter formation.

期刊论文 2024-06-18 DOI: 10.1128/aem.00724-24 ISSN: 0099-2240

A large number of dead seedlings can occur in saline soils, which seriously affects the large-scale cultivation of rice. This study investigated the effects of plant growth regulators (PGRs) and nitrogen application on seedling growth and salt tolerance (Oryza sativa L.), which is of great significance for agricultural production practices. A conventional rice variety, Huang Huazhan, was selected for this study. Non-salt stress treatments included 0% NaCl (CK treatment), CK + 0.05 g N/pot (N treatment), CK + 40 mg center dot L-1 5-aminolevulinic acid (5-ALA) (A treatment), and CK + 30 mg center dot L-1 diethylaminoethyl acetate (DTA-6) (D treatment). Salt stress treatments included 0.3% NaCl (S treatment), N + 0.3% NaCl (NS treatment), A + 0.3% NaCl (AS treatment), and D + 0.3% NaCl (DS treatment). When 3 leaves and 1 heart emerged from the soil, plants were sprayed with DTA-6 and 5-ALA, followed by the application of 0.3% NaCl (w/w) to the soil after 24 h. Seedling morphology and photosynthetic indices, as well as carbohydrate metabolism and key enzyme activities, were determined for each treatment. Our results showed that N, A, and D treatments promoted seedling growth, photosynthesis, carbohydrate levels, and the activities of key enzymes involved in carbon metabolism when compared to the CK treatment. The A treatment had the most significant effect, with increases in aboveground dry weight and net photosynthetic rates (Pn) ranging from 17.74% to 41.02% and 3.61% to 32.60%, respectively. Stomatal limiting values (Ls) significantly decreased from 19.17% to 43.02%. Salt stress significantly inhibited seedling growth. NS, AS, and DS treatments alleviated the morphological and physiological damage of salt stress on seedlings when compared to the S treatment. The AS treatment was the most effective in improving seedling morphology, promoting photosynthesis, increasing carbohydrate levels, and key enzyme activities. After AS treatment, increases in aboveground dry weight, net photosynthetic rate, soluble sugar content, total sucrose synthase, and amylase activities were 17.50% to 50.79%, 11.39% to 98.10%, 20.20% to 80.85%, 21.21% to 33.53%, and 22.17% to 34.19%, respectively, when compared to the S treatment. In summary, foliar sprays of 5-ALA, DTA-6, and additional nitrogen fertilizer enhanced rice seedling growth, increased photosynthesis, lowered Ls values, and improved seedling salt tolerance. Spraying two regulators, 5-ALA and DTA-6, quantitatively increased the effect of nitrogen fertilizer, with comparable effects on NaCl stress regulation. This study provides the basis for efficient agricultural production.

期刊论文 2024-03-01 DOI: 10.3390/metabo14030142

Carbon storage in mangroves is considered a natural solution to mitigate climate change as an essential coastal blue carbon ecosystem service for climate change. The magnitude of carbon storage in soils depends on the carbon metabolic activities of the microbial community, and these dynamics are subject to the influence of climate conditions, including seasonal changes. Despite mangroves being one of the world's highest in soil carbon density and carbon sequestration rates, our understanding of this aspect remains limited. Here, we investigated the seasonal changes in the carbon metabolic profile of microbial communities in mangrove soils along the seashore of the whole Hainan Island (with the highest diversity of mangrove species in China). There was a clear season dependence in the metabolic activity and functional diversity of mangrove soil microbial community on Hainan Island, showing the trend of the rainy season > the dry season. The carbon metabolic activity in the rainy season is three times higher than in the dry season. The season plays a critical role in shaping the carbon functional diversity of microbial communities, which that by changing biotic interactions and soil properties, particularly soil TN, NO2 -N, plant richness and mean DBH. This study provides important insights into comprehend the carbon metabolic functional diversity of microbial communities in mangrove soils and provides basic data support for predicting the blue carbon feedback of mangrove ecosystems to global climate change.

期刊论文 2024-02-01 DOI: 10.1016/j.catena.2023.107710 ISSN: 0341-8162

Water stress can trigger acclimation responses and damage plants. The aim of this study was to evaluate the integrative responses of cotton hydraulic conductance, leaf photosynthesis, and carbon metabolism to short-term drought and subsequent rewatering. A water-controlled pot experiment was conducted in 2020, with soil water drying continuing for one day (D1), two days (D2), and three days (D3) after it reached 40% +/- 5% of the soil water holding capacity at the blooming stage of cotton, and the soil was then rewatered to the soil water holding capacity. We investigated how the stem hydraulic conductance, gas exchange, and biochemical traits of cotton were affected by imposed drought stress and subsequent rewatering. The hydraulic characteristics of cotton in the D2 and D3 treatments evolved with damage, complete closure of stomatal conductance, and complete deterioration of photosynthesis, in addition to severe floating changes in the carbon metabolism affected by drought. The leaves' functional characteristics after rewatering cannot be completely recovered to full-irrigation levels, and the recovery extent was strongly linked to the duration. Consequently, it is considered desirable to maintain normal physiological activity during the cotton reproductive period, and the drought episode can be sustained for 1 day in a long-term perspective when the soil water content is depleted to 40% +/- 5% of the soil water holding capacity. These results can provide in-depth ideas for better understanding the hydraulic and physiological responses of cotton to drought episodes and rewatering, and they can help drought-affected cotton to cope with future climate change.

期刊论文 2024-01-01 DOI: 10.3390/agronomy14010071
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