Limited knowledge about the variation patterns of bacterial community composition in the sand and vegetative ecosystems confines our understanding regarding the contribution of the sand dune to desert areas. In this study, 454 pyrosequencing platforms were adopted to determine the community structure of bacteria and diversity of sand dunes in northeastern Qinghai-Tibet Plateau, China: 50 cm deep, rhizosphere, physical crusts, and biological crusts representing sand and vegetative ecosystems, respectively. The findings revealed significant variation in bacterial diversities and the structure of communities in the sand and vegetative ecosystems. The dominant bacterial phyla of sand and vegetative ecosystems were Firmicutes (47%), Actinobacteria (21%), Proteobacteria (16%), and Bacteroidetes (13%), while Lactococcus (50%) was found to be the dominant genus. Furthermore, samples with high alpha-diversity indices (Chao 1 and Shannon) for the vegetative ecosystem have the lowest modularity index and the largest number of biomarkers, with some exceptions. Redundancy analysis exhibited that environmental factors could explain 72% (phyla) and 67% (genera) of the bacterial communities, with EC, TC, and TOC being the major driving factors. This study expands our understanding of bacterial community composition in the desert ecosystem. The findings suggest that variations in the sand and vegetative ecosystems, such as those predicted by environmental factors, may reduce the abundance and diversity of bacteria, a response that likely affects the provision of key ecosystem processes by desert regions.

The Loess Plateau, located in Gansu Province, is an important energy base in China because most of the oil and gas resources are distributed in Gansu Province. In the last 40 a, ecological environment in this region has been extremely destroyed due to the over-exploitation of crude-oil resources. Remediation of crude-oil contaminated soil in this area remains to be a challenging task. In this study, in order to elucidate the effects of organic compost and biochar on phytoremediation of crude-oil contaminated soil (20 g/kg) by Calendula officinalis L., we designed five treatments, i.e., natural attenuation (CK), planted C. officinalis only (P), planted C. officinalis with biochar amendment (PB), planted C. officinalis with organic compost amendment (PC), and planted C. officinalis with co-amendment of biochar and organic compost (PBC). After 152 d of cultivation, total petroleum hydrocarbons (TPH) removal rates of CK, P, PB, PC and PBC were 6.36%, 50.08%, 39.58%, 73.10% and 59.87%, respectively. Shoot and root dry weights of C. officinalis significantly increased by 172.31% and 80.96% under PC and 311.61% and 145.43% under PBC, respectively as compared with P (P<0.05). Total chlorophyll contents in leaves of C. officinalis under P, PC and PBC significantly increased by 77.36%, 125.50% and 79.80%, respectively (P<0.05) as compared with PB. Physical-chemical characteristics and enzymatic activity of soil in different treatments were also assessed. The highest total N, total P, available N, available P and SOM occurred in PC, followed by PBC (P<0.05). C. officinalis rhizospheric soil dehydrogenase (DHA) and polyphenol oxidase (PPO) activities in PB were lower than those of other treatments (P<0.05). The values of ACE (abundance-based coverage estimators) and Chao indices for rhizospheric bacteria were the highest under PC followed by PBC, P, PB and CK (P<0.05). However, the Shannon index for bacteria was the highest under PC and PBC, followed by P, PB and CK (P<0.05). In terms of soil microbial community composition, Proteiniphilum, Immundisolibacteraceae and Solimonadaceae were relatively more abundant under PC and PBC. Relative abundances of Pseudallescheria, Ochroconis, Fusarium, Sarocladium, Podospora, Apodus, Pyrenochaetopsis and Schizpthecium under PC and PBC were higher, while relative abundances of Gliomastix, Aspergillus and Alternaria were lower under PC and PBC. As per the nonmetric multidimensional scaling (NMDS) analysis, application of organic compost significantly promoted soil N and P contents, shoot length, root vitality, chlorophyll ratio, total chlorophyll, abundance and diversity of rhizospheric soil microbial community in C. officinalis. A high pH value and lower soil N and P contents induced by biochar, altered C. officinalis rhizospheric soil microbial community composition, which might have restrained its phytoremediation efficiency. The results suggest that organic compost-assisted C. officinalis phytoremediation for crude-oil contaminated soil was highly effective in the Loess Plateau, China.

Global climate change is accompanied by changes in the amounts of ice and snow. These changes have both a direct effect on the plant community structure, primary productivity and carbon cycle and an indirect influence on the belowground ecosystem. However, the effects of changes in snowpack on the soil environment and belowground ecological processes, particularly in soil microbial communities are still poorly understood in alpine meadows. We conducted a field study of controlled snowpack in the eastern margin of the Tibetan Plateau, where five treatments were set up, named as S0, S1, S2, S3, and S4 (S1: the amount of a natural snowpack; S2, S3, and S4 were twofold, threefold, and fourfold of Sl, respectively; and SO: completely removed snow). Soil physicochemical properties, soil community structure and diversity measured by 16S rRNA gene amplicons were studied. The results indicated that 1) as snowpack increased, the average soil temperature decreased, but soil moisture and soil compaction increased; 2) soil chemical properties (pH, available nitrogen, available potassium, available phosphorus, total nitrogen, total potassium, total phosphorus and total soil organic carbon) all changed as snowpack changed; and 3) increasing snowpack led to a decrease in the relative abundance of Acidobacteria, but Bacteroidetes and Actinobacteria did not decline in response to increasing snowpack. In summary, these results showed that soil bacterial communities are sensitive to changes in snowpack in alpine meadows.

The increasing temperature in Arctic tundra deepens the active layer, which is the upper layer of permafrost soil that experiences repeated thawing and freezing. The increasing of soil temperature and the deepening of active layer seem to affect soil microbial communities. Therefore, information on soil microbial communities at various soil depths is essential to understand their potential responses to climate change in the active layer soil. We investigated the community structure of soil bacteria in the active layer from moist acidic tundra in Council, Alaska. We also interpreted their relationship with some relevant soil physicochemical characteristics along soil depth with a fine scale (5 cm depth interval). The bacterial community structure was found to change along soil depth. The relative abundances of Acidobacteria, Gammaproteobacteria, Planctomycetes, and candidate phylum WPS-2 rapidly decreased with soil depth, while those of Bacteroidetes, Chloroflexi, Gemmatimonadetes, and candidate AD3 rapidly increased. A structural shift was also found in the soil bacterial communities around 20 cm depth, where two organic (upper Oi and lower Oa) horizons are subdivided. The quality and the decomposition degree of organic matter might have influenced the bacterial community structure. Besides the organic matter quality, the vertical distribution of bacterial communities was also found to be related to soil pH and total phosphorus content. This study showed the vertical change of bacterial community in the active layer with a fine scale resolution and the possible influence of the quality of soil organic matter on shaping bacterial community structure.

Alpine vegetation is considered to be particularly sensitive to climate changes. Here we document changes in species richness, distribution and composition over the past 50 years by resurveying vegetation in Rondane, a well-studied alpine area in central Norway. We estimated changes in species occurrences, species richness and species' realized optima to study relationships between vegetational and environmental change. We used a weighted average approach with elevation and indicator values for light, temperature, pH, moisture, nutrients and tolerance to snow-cover duration. Permutation tests, allowing for unequal sampling in the original survey and the resurvey, indicated whether vegetation changes were statistically significant. We found no significant change in the average number of species per plot since 1950. Of 21 species analysed for changes in frequency and realized optimum, ten showed statistically significant changes in frequency (six decreased, four increased), and six exhibited statistically significant changes in their optimum along the soil-pH gradient. Statistically significant optimum changes were found along the nutrient and light gradients (three species) and the elevation and snow-cover gradients (two species). No statistically significant changes were found along the temperature or moisture gradients. In comparison with other studies, our results suggest that recent climate changes have had a relatively low impact on alpine vegetation in the Rondane mountains. This is indicated by our species optimum analysis, which revealed few changes along gradients that can be directly linked to the climate (temperature and soil moisture) whereas most detected changes appear to be responses to factors related to soil pH. The relative constancy of species' optima and hence species composition may be explained most parsimoniously by the species pool in the Rondane area, which consists largely of common and widespread species with wide ecological amplitudes and hence broad tolerances to environmental change.

Differences in the summer insulative value of the zonal vegetation mat affect the depth of thaw along the Arctic bioclimate gradient. Toward the south, taller, denser plant canopies and thicker organic horizons counter the effects of warmer temperatures, so that there is little correspondence between active layer depths and summer air temperature. We examined the interactions between summer warmth, vegetation (biomass, Leaf Area Index, Normalized Difference Vegetation Index), soil (texture and pH), and thaw depths at 17 sites in three bioclimate subzones of the Arctic Slope 2 and Seward Peninsula, Alaska. Total plant biomass in subzones C, D, and E averaged 421 g m(-2), 503 g m(-2), and 1178 g m(-2) respectively. Soil organic horizons averaged 4 cm in subzone C, 8 cm in subzone D, and 14 cm in subzone E. The average late-August thaw depths in subzones C, D, and E were 44 cm, 55 cm, and 47 cm respectively. Non-acidic soils in equivalent climates generally have shorter-stature sedge-dominated canopies and many frost boils, and consequently have thicker active layers than acidic soils. The trends reported here are useful for palaeo-ecological reconstructions and predictions of future ecosystem changes in the Low Arctic. Climate change will not lead to uniform thickening of the active layer, and could lead to shallower active layers in some presently dry areas due to paludification. Copyright (C) 2003 John Wiley Sons, Ltd.