In pan-Arctic permafrost regions, longitudinal ventilation ducts are often installed in embankments to cool the underlying permafrost and thereby ensure road stability. However, the current design methods for embankments with longitudinal ventilation ducts (ED) normally simplify the conjugate heat transfer process between the duct wall and air in the duct. In this study, based on the chimney effect and the theory of fluid flow and heat transfer, we propose an improved numerical method for evaluating the cooling performance of the ED. Using this method, we conduct an assessment of the influences of duct configuration on the efficiency of ventilation duct cooling in winter. The results indicate that increasing the diameter of the duct and the height of the duct outlet can effectively improve the radial cooling range of the ventilation duct. However, the cooling performance of the ventilation duct becomes worse when the length of the duct is increased. To address the limited cooling performance of the ED, we design a crushed-rock interlayer embankment installed with longitudinal ventilation ducts (CED). It is found that the CED is more effective at maintaining the long-term thermal stability of the road in a typical panArctic permafrost region when compared to the ED and the crushed-rock interlayer embankment. Furthermore, a cost analysis of the four different embankment designs reveals that the CED is a financially viable option for embankment construction in permafrost regions.